Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 MIR4758-201ENST00000577688 71 ntBASIC20.94■□□□□ 0.94
RTN4Q9NQC3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 AC060766.5-201ENST00000590539 871 ntBASIC20.94■□□□□ 0.94
RTN4Q9NQC3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 C8orf49-201ENST00000525043 1968 ntBASIC20.94■□□□□ 0.94
RTN4Q9NQC3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 SLC29A4P1-201ENST00000398760 971 ntBASIC20.93■□□□□ 0.94
RTN4Q9NQC3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 NCF1B-203ENST00000435988 1254 ntBASIC20.93■□□□□ 0.94
RTN4Q9NQC3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.93■□□□□ 0.94
RTN4Q9NQC3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 AC005786.4-201ENST00000623369 682 ntBASIC20.93■□□□□ 0.94
RTN4Q9NQC3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTN4Q9NQC3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 AL365209.1-201ENST00000624418 6473 ntBASIC20.92■□□□□ 0.94
RTN4Q9NQC3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.92■□□□□ 0.94
RTN4Q9NQC3 AC083906.6-201ENST00000641366 219 ntBASIC20.92■□□□□ 0.94
RTN4Q9NQC3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTN4Q9NQC3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.91■□□□□ 0.94
RTN4Q9NQC3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms