Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 MMP23A-201ENST00000234610 1017 ntBASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 AC096633.1-201ENST00000422446 749 ntBASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 RASA4DP-201ENST00000460726 1199 ntBASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 AL136038.4-201ENST00000603606 1261 ntBASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC52A3Q9NQ40 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 AL596275.1-201ENST00000423464 877 ntBASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC52A3Q9NQ40 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC52A3Q9NQ40 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC52A3Q9NQ40 RNF216P1-203ENST00000404404 2427 ntBASIC16.71■□□□□ 0.27
SLC52A3Q9NQ40 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC52A3Q9NQ40 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC52A3Q9NQ40 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC52A3Q9NQ40 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC52A3Q9NQ40 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC52A3Q9NQ40 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC52A3Q9NQ40 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms