Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 AP002414.1-201ENST00000391405 1147 ntBASIC19.71■□□□□ 0.75
VTA1Q9NP79 MRPL20P1-201ENST00000400819 433 ntBASIC19.71■□□□□ 0.75
VTA1Q9NP79 PMS2P2-201ENST00000425039 1128 ntBASIC19.71■□□□□ 0.75
VTA1Q9NP79 DNAJB3-202ENST00000449667 1266 ntBASIC19.71■□□□□ 0.75
VTA1Q9NP79 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 YBX1P5-201ENST00000509441 847 ntBASIC19.71■□□□□ 0.75
VTA1Q9NP79 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 REXO1L9P-201ENST00000604264 2108 ntBASIC19.71■□□□□ 0.75
VTA1Q9NP79 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 AL020996.1-203ENST00000536896 2307 ntBASIC19.7■□□□□ 0.74
VTA1Q9NP79 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTA1Q9NP79 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTA1Q9NP79 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTA1Q9NP79 PTCHD3P3-201ENST00000403073 906 ntBASIC19.7■□□□□ 0.74
VTA1Q9NP79 LINC00982-205ENST00000420957 435 ntBASIC19.7■□□□□ 0.74
VTA1Q9NP79 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTA1Q9NP79 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 AC018845.2-201ENST00000568326 409 ntBASIC19.7■□□□□ 0.74
VTA1Q9NP79 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 GGTLC5P-201ENST00000617623 998 ntBASIC19.7■□□□□ 0.74
VTA1Q9NP79 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTA1Q9NP79 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTA1Q9NP79 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTA1Q9NP79 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTA1Q9NP79 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VTA1Q9NP79 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VTA1Q9NP79 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.7■□□□□ 0.74
VTA1Q9NP79 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VTA1Q9NP79 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 AL138781.2-201ENST00000617896 1843 ntBASIC19.69■□□□□ 0.74
VTA1Q9NP79 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VTA1Q9NP79 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VTA1Q9NP79 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VTA1Q9NP79 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VTA1Q9NP79 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VTA1Q9NP79 IGLL3P-201ENST00000412472 434 ntBASIC19.69■□□□□ 0.74
VTA1Q9NP79 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 AP000997.3-201ENST00000623333 2250 ntBASIC19.69■□□□□ 0.74
VTA1Q9NP79 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VTA1Q9NP79 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
VTA1Q9NP79 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.69■□□□□ 0.74
VTA1Q9NP79 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VTA1Q9NP79 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 KRT18P55-202ENST00000578578 1546 ntBASIC19.68■□□□□ 0.74
VTA1Q9NP79 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTA1Q9NP79 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.68■□□□□ 0.74
VTA1Q9NP79 C20orf181-201ENST00000623918 480 ntBASIC19.68■□□□□ 0.74
VTA1Q9NP79 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms