Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 AC092919.2-201ENST00000623631 1645 ntBASIC20.09■□□□□ 0.81
ZFYVE28Q9HCC9 AC009336.1-201ENST00000608941 1553 ntBASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 BASP1P1-201ENST00000430708 665 ntBASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 FAM185BP-201ENST00000443595 716 ntBASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.08■□□□□ 0.81
ZFYVE28Q9HCC9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZFYVE28Q9HCC9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.08■□□□□ 0.8
ZFYVE28Q9HCC9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
ZFYVE28Q9HCC9 PHGDH-209ENST00000641074 1780 ntBASIC20.08■□□□□ 0.8
ZFYVE28Q9HCC9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 AC002056.1-201ENST00000395613 760 ntBASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 HLA-J-202ENST00000469281 1241 ntBASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 AC087641.1-201ENST00000557561 1021 ntBASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 AC026120.1-201ENST00000611536 926 ntBASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.07■□□□□ 0.8
ZFYVE28Q9HCC9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 GK-202ENST00000378941 458 ntTSL 3 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 ADH5P3-201ENST00000433842 1137 ntBASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 AC005237.2-201ENST00000434368 219 ntBASIC20.06■□□□□ 0.8
ZFYVE28Q9HCC9 CNN2P2-201ENST00000443536 909 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms