Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TUBB1Q9H4B7 AC016396.2-201ENST00000562575 1417 ntBASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 AC116353.5-201ENST00000638148 1699 ntBASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 MIR662-201ENST00000384847 95 ntBASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 LIN28AP1-201ENST00000429574 405 ntBASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 MTCL1P1-201ENST00000446207 792 ntBASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 YBX1P2-201ENST00000489612 999 ntBASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 AC012306.2-201ENST00000609350 630 ntBASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 LINC01311-201ENST00000565162 1445 ntBASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TUBB1Q9H4B7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 AL353692.3-201ENST00000407031 1396 ntBASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 AGGF1P2-201ENST00000426656 2106 ntBASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 KRT18P38-201ENST00000449496 1282 ntBASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 AP003733.1-201ENST00000491725 852 ntBASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 AC073508.3-201ENST00000619697 1419 ntBASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB1Q9H4B7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB1Q9H4B7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms