Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 DDX43P3-201ENST00000441064 443 ntBASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 AC005332.3-201ENST00000589904 676 ntBASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 GPR32P1-201ENST00000601788 811 ntBASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 LINC01311-201ENST00000565162 1445 ntBASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF3BQ9BZI7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 AC092647.4-201ENST00000457211 535 ntBASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 AC083849.1-201ENST00000615227 514 ntBASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 AC099398.1-201ENST00000567919 2776 ntBASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.11■□□□□ 0.97
UPF3BQ9BZI7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 AC068472.1-201ENST00000474589 881 ntBASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 AL390719.2-201ENST00000606993 987 ntBASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 AC091076.1-201ENST00000610741 619 ntBASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 Z83836.1-201ENST00000624605 1642 ntBASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.1■□□□□ 0.97
UPF3BQ9BZI7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF3BQ9BZI7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF3BQ9BZI7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.09■□□□□ 0.97
UPF3BQ9BZI7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
UPF3BQ9BZI7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPF3BQ9BZI7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UPF3BQ9BZI7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
UPF3BQ9BZI7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms