Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 AC004461.1-201ENST00000412461 403 ntBASIC15.82■□□□□ 0.12
SPENQ96T58 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SPENQ96T58 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.82■□□□□ 0.12
SPENQ96T58 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.82■□□□□ 0.12
SPENQ96T58 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SPENQ96T58 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.82■□□□□ 0.12
SPENQ96T58 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.82■□□□□ 0.12
SPENQ96T58 MRPS18AP1-201ENST00000414458 589 ntBASIC15.82■□□□□ 0.12
SPENQ96T58 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SPENQ96T58 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.82■□□□□ 0.12
SPENQ96T58 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.82■□□□□ 0.12
SPENQ96T58 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 GAPDHP21-201ENST00000450301 1010 ntBASIC15.82■□□□□ 0.12
SPENQ96T58 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.82■□□□□ 0.12
SPENQ96T58 AC093214.1-201ENST00000511688 1107 ntBASIC15.82■□□□□ 0.12
SPENQ96T58 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.82■□□□□ 0.12
SPENQ96T58 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SPENQ96T58 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPENQ96T58 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.81■□□□□ 0.12
SPENQ96T58 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.81■□□□□ 0.12
SPENQ96T58 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.81■□□□□ 0.12
SPENQ96T58 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.81■□□□□ 0.12
SPENQ96T58 AL805961.1-202ENST00000641562 540 ntBASIC15.81■□□□□ 0.12
SPENQ96T58 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.81■□□□□ 0.12
SPENQ96T58 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.81■□□□□ 0.12
SPENQ96T58 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 DUX4L27-201ENST00000554796 1261 ntBASIC15.81■□□□□ 0.12
SPENQ96T58 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
SPENQ96T58 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.81■□□□□ 0.12
SPENQ96T58 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.81■□□□□ 0.12
SPENQ96T58 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.81■□□□□ 0.12
SPENQ96T58 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SPENQ96T58 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.81■□□□□ 0.12
SPENQ96T58 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.81■□□□□ 0.12
SPENQ96T58 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPENQ96T58 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.8■□□□□ 0.12
SPENQ96T58 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SPENQ96T58 AC005034.1-201ENST00000426657 489 ntBASIC15.8■□□□□ 0.12
SPENQ96T58 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.8■□□□□ 0.12
SPENQ96T58 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.8■□□□□ 0.12
SPENQ96T58 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.8■□□□□ 0.12
SPENQ96T58 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SPENQ96T58 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.8■□□□□ 0.12
SPENQ96T58 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SPENQ96T58 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.8■□□□□ 0.12
SPENQ96T58 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SPENQ96T58 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SPENQ96T58 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.8■□□□□ 0.12
SPENQ96T58 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SPENQ96T58 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.8■□□□□ 0.12
SPENQ96T58 KLF4P1-201ENST00000412782 1185 ntBASIC15.8■□□□□ 0.12
SPENQ96T58 RN7SL204P-201ENST00000582831 262 ntBASIC15.8■□□□□ 0.12
SPENQ96T58 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.8■□□□□ 0.12
SPENQ96T58 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SPENQ96T58 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.8■□□□□ 0.12
SPENQ96T58 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.8■□□□□ 0.12
SPENQ96T58 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.8■□□□□ 0.12
SPENQ96T58 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.8■□□□□ 0.12
SPENQ96T58 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.8■□□□□ 0.12
SPENQ96T58 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.8■□□□□ 0.12
SPENQ96T58 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.8■□□□□ 0.12
SPENQ96T58 AC073592.3-201ENST00000625118 1834 ntBASIC15.8■□□□□ 0.12
SPENQ96T58 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.8■□□□□ 0.12
SPENQ96T58 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SPENQ96T58 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.8■□□□□ 0.12
SPENQ96T58 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms