Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 AL121761.2-201ENST00000598007 1648 ntBASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 AC004461.1-201ENST00000412461 403 ntBASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 FAM185BP-201ENST00000443595 716 ntBASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CRAMP1Q96RY5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 AC068137.2-201ENST00000605408 478 ntBASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 REXO1L3P-201ENST00000622202 1288 ntBASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRAMP1Q96RY5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 HLA-J-203ENST00000494367 1087 ntBASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 SPCS2P1-201ENST00000561636 679 ntBASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 AC011467.4-201ENST00000594891 528 ntBASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 AC135776.1-201ENST00000319817 2481 ntBASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CRAMP1Q96RY5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.46■■□□□ 1.03
CRAMP1Q96RY5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRAMP1Q96RY5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CRAMP1Q96RY5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms