Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.72■□□□□ 0.59
ZNF558Q96NG5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF558Q96NG5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 AP002414.1-201ENST00000391405 1147 ntBASIC18.71■□□□□ 0.59
ZNF558Q96NG5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 AC002558.1-201ENST00000488906 803 ntBASIC18.71■□□□□ 0.59
ZNF558Q96NG5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 AL353135.1-201ENST00000606729 504 ntBASIC18.71■□□□□ 0.59
ZNF558Q96NG5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF558Q96NG5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF558Q96NG5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF558Q96NG5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 MYCLP1-201ENST00000372451 1075 ntBASIC18.7■□□□□ 0.58
ZNF558Q96NG5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 LINC00982-205ENST00000420957 435 ntBASIC18.7■□□□□ 0.58
ZNF558Q96NG5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 AC010507.1-201ENST00000633895 436 ntBASIC18.7■□□□□ 0.58
ZNF558Q96NG5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF558Q96NG5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 ELL2P1-201ENST00000413990 1906 ntBASIC18.69■□□□□ 0.58
ZNF558Q96NG5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 CNN2P11-201ENST00000429351 262 ntBASIC18.69■□□□□ 0.58
ZNF558Q96NG5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 CEND1P1-201ENST00000451006 455 ntBASIC18.69■□□□□ 0.58
ZNF558Q96NG5 AC096734.2-201ENST00000562054 433 ntBASIC18.69■□□□□ 0.58
ZNF558Q96NG5 PDPK2P-202ENST00000562415 1191 ntBASIC18.69■□□□□ 0.58
ZNF558Q96NG5 AC004877.2-201ENST00000623941 599 ntBASIC18.69■□□□□ 0.58
ZNF558Q96NG5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 BCAR1-209ENST00000546196 1340 ntBASIC18.69■□□□□ 0.58
ZNF558Q96NG5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZNF558Q96NG5 WIZP1-201ENST00000531444 2299 ntBASIC18.69■□□□□ 0.58
ZNF558Q96NG5 AC135776.1-201ENST00000319817 2481 ntBASIC18.68■□□□□ 0.58
ZNF558Q96NG5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 SLC25A24-204ENST00000569674 2357 ntBASIC18.68■□□□□ 0.58
ZNF558Q96NG5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms