Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 AC106820.2-201ENST00000563775 3264 ntBASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 AC106795.1-205ENST00000512851 1056 ntBASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 AP002469.2-201ENST00000531724 424 ntBASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 AC008608.2-201ENST00000606089 416 ntBASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.27■□□□□ 0.52
PRICKLE1Q96MT3 KRT18P55-202ENST00000578578 1546 ntBASIC18.27■□□□□ 0.51
PRICKLE1Q96MT3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.27■□□□□ 0.51
PRICKLE1Q96MT3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
PRICKLE1Q96MT3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PRICKLE1Q96MT3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 AL160237.2-201ENST00000556165 472 ntBASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE1Q96MT3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 AC067852.2-201ENST00000590513 2313 ntBASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 ABCD1P5-201ENST00000445663 754 ntBASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 FDX1P1-201ENST00000449115 551 ntBASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 FGFR3P6-201ENST00000457012 610 ntBASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 AC122714.2-201ENST00000502787 707 ntBASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 AL355877.3-201ENST00000622820 899 ntBASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE1Q96MT3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms