Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 COX5BP2-201ENST00000392354 334 ntBASIC19.1■□□□□ 0.65
ALPK3Q96L96 TSSK5P-201ENST00000423978 907 ntBASIC19.1■□□□□ 0.65
ALPK3Q96L96 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 DDX43P3-201ENST00000441064 443 ntBASIC19.1■□□□□ 0.65
ALPK3Q96L96 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 AL662799.1-202ENST00000614205 422 ntBASIC19.1■□□□□ 0.65
ALPK3Q96L96 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 RN7SL589P-201ENST00000481268 310 ntBASIC19.1■□□□□ 0.65
ALPK3Q96L96 RARRES2P8-201ENST00000566335 367 ntBASIC19.1■□□□□ 0.65
ALPK3Q96L96 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
ALPK3Q96L96 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ALPK3Q96L96 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALPK3Q96L96 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALPK3Q96L96 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ALPK3Q96L96 AC002056.1-201ENST00000395613 760 ntBASIC19.09■□□□□ 0.65
ALPK3Q96L96 AC079776.1-201ENST00000401540 1152 ntBASIC19.09■□□□□ 0.65
ALPK3Q96L96 MIR1909-201ENST00000411312 80 ntBASIC19.09■□□□□ 0.65
ALPK3Q96L96 LINC00982-205ENST00000420957 435 ntBASIC19.09■□□□□ 0.65
ALPK3Q96L96 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.09■□□□□ 0.65
ALPK3Q96L96 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.09■□□□□ 0.65
ALPK3Q96L96 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.09■□□□□ 0.65
ALPK3Q96L96 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.09■□□□□ 0.65
ALPK3Q96L96 AC027307.3-201ENST00000594262 1100 ntBASIC19.09■□□□□ 0.65
ALPK3Q96L96 AKAP8P1-201ENST00000434743 1349 ntBASIC19.09■□□□□ 0.65
ALPK3Q96L96 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALPK3Q96L96 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALPK3Q96L96 ANO7L1-203ENST00000602586 1720 ntBASIC19.09■□□□□ 0.65
ALPK3Q96L96 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALPK3Q96L96 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ALPK3Q96L96 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALPK3Q96L96 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALPK3Q96L96 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALPK3Q96L96 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ALPK3Q96L96 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ALPK3Q96L96 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.08■□□□□ 0.65
ALPK3Q96L96 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALPK3Q96L96 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ALPK3Q96L96 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ALPK3Q96L96 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ALPK3Q96L96 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ALPK3Q96L96 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.08■□□□□ 0.64
ALPK3Q96L96 CU639417.3-201ENST00000624240 1404 ntBASIC19.08■□□□□ 0.64
ALPK3Q96L96 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ALPK3Q96L96 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.08■□□□□ 0.64
ALPK3Q96L96 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.08■□□□□ 0.64
ALPK3Q96L96 NME2P1-201ENST00000426182 414 ntBASIC19.08■□□□□ 0.64
ALPK3Q96L96 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ALPK3Q96L96 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.08■□□□□ 0.64
ALPK3Q96L96 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.08■□□□□ 0.64
ALPK3Q96L96 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.08■□□□□ 0.64
ALPK3Q96L96 AC026150.2-201ENST00000564693 1156 ntBASIC19.08■□□□□ 0.64
ALPK3Q96L96 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ALPK3Q96L96 STK25P1-201ENST00000585406 838 ntBASIC19.08■□□□□ 0.64
ALPK3Q96L96 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.08■□□□□ 0.64
ALPK3Q96L96 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ALPK3Q96L96 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ALPK3Q96L96 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ALPK3Q96L96 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms