Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC47A1Q96FL8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC47A1Q96FL8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 CYP2D8P-201ENST00000433633 1490 ntBASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 TSPY15P-201ENST00000457163 923 ntBASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 AC010947.1-201ENST00000623454 693 ntBASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC47A1Q96FL8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 LINC01451-201ENST00000623792 534 ntBASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 KRT8P9-201ENST00000558927 1449 ntBASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC47A1Q96FL8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms