Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 SPDYE21P-201ENST00000413323 827 ntBASIC17.82■□□□□ 0.44
CHD5Q8TDI0 KRT18P27-201ENST00000427733 1299 ntBASIC17.82■□□□□ 0.44
CHD5Q8TDI0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 IGHV3-22-201ENST00000520721 359 ntBASIC17.82■□□□□ 0.44
CHD5Q8TDI0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 AC243591.1-201ENST00000452967 1364 ntBASIC17.81■□□□□ 0.44
CHD5Q8TDI0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CHD5Q8TDI0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 OR7E14P-202ENST00000530490 1290 ntBASIC17.8■□□□□ 0.44
CHD5Q8TDI0 AP001005.1-201ENST00000571755 1248 ntBASIC17.8■□□□□ 0.44
CHD5Q8TDI0 AL671883.3-201ENST00000603274 991 ntBASIC17.8■□□□□ 0.44
CHD5Q8TDI0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD5Q8TDI0 AC018470.1-201ENST00000624790 3129 ntBASIC17.79■□□□□ 0.44
CHD5Q8TDI0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 AC139887.3-201ENST00000568585 713 ntBASIC17.79■□□□□ 0.44
CHD5Q8TDI0 AC025062.2-201ENST00000605477 670 ntBASIC17.79■□□□□ 0.44
CHD5Q8TDI0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.79■□□□□ 0.44
CHD5Q8TDI0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms