Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SCML4Q8N228 KLF4P1-201ENST00000412782 1185 ntBASIC18.36■□□□□ 0.53
SCML4Q8N228 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.36■□□□□ 0.53
SCML4Q8N228 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.36■□□□□ 0.53
SCML4Q8N228 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.36■□□□□ 0.53
SCML4Q8N228 STK19B-204ENST00000512515 211 ntBASIC18.36■□□□□ 0.53
SCML4Q8N228 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCML4Q8N228 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.36■□□□□ 0.53
SCML4Q8N228 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.36■□□□□ 0.53
SCML4Q8N228 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.36■□□□□ 0.53
SCML4Q8N228 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.36■□□□□ 0.53
SCML4Q8N228 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCML4Q8N228 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.35■□□□□ 0.53
SCML4Q8N228 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.35■□□□□ 0.53
SCML4Q8N228 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.35■□□□□ 0.53
SCML4Q8N228 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.35■□□□□ 0.53
SCML4Q8N228 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SCML4Q8N228 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SCML4Q8N228 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.35■□□□□ 0.53
SCML4Q8N228 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.35■□□□□ 0.53
SCML4Q8N228 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SCML4Q8N228 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.35■□□□□ 0.53
SCML4Q8N228 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.35■□□□□ 0.53
SCML4Q8N228 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.35■□□□□ 0.53
SCML4Q8N228 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SCML4Q8N228 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.35■□□□□ 0.53
SCML4Q8N228 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.35■□□□□ 0.53
SCML4Q8N228 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.35■□□□□ 0.53
SCML4Q8N228 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.35■□□□□ 0.53
SCML4Q8N228 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.35■□□□□ 0.53
SCML4Q8N228 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SCML4Q8N228 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.35■□□□□ 0.53
SCML4Q8N228 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.35■□□□□ 0.53
SCML4Q8N228 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.35■□□□□ 0.53
SCML4Q8N228 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 AC134043.2-201ENST00000624206 2238 ntBASIC18.35■□□□□ 0.53
SCML4Q8N228 AL355312.1-201ENST00000407115 2176 ntBASIC18.35■□□□□ 0.53
SCML4Q8N228 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.35■□□□□ 0.53
SCML4Q8N228 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCML4Q8N228 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.34■□□□□ 0.53
SCML4Q8N228 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SCML4Q8N228 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.34■□□□□ 0.53
SCML4Q8N228 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.34■□□□□ 0.53
SCML4Q8N228 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SCML4Q8N228 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.34■□□□□ 0.53
SCML4Q8N228 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.34■□□□□ 0.53
SCML4Q8N228 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 AP002469.2-201ENST00000531724 424 ntBASIC18.34■□□□□ 0.53
SCML4Q8N228 SART3-203ENST00000546611 1184 ntBASIC18.34■□□□□ 0.53
SCML4Q8N228 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.34■□□□□ 0.53
SCML4Q8N228 NKAPP1-205ENST00000585790 367 ntBASIC18.34■□□□□ 0.53
SCML4Q8N228 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 TP73-AS1-207ENST00000624167 988 ntBASIC18.34■□□□□ 0.53
SCML4Q8N228 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.34■□□□□ 0.53
SCML4Q8N228 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SCML4Q8N228 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.34■□□□□ 0.53
SCML4Q8N228 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML4Q8N228 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML4Q8N228 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML4Q8N228 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML4Q8N228 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.53
SCML4Q8N228 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.33■□□□□ 0.53
SCML4Q8N228 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML4Q8N228 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML4Q8N228 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML4Q8N228 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML4Q8N228 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SCML4Q8N228 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML4Q8N228 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.53
SCML4Q8N228 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms