Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPAS4Q8IUM7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 KRT19P2-202ENST00000557173 1012 ntBASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 OR7E47P-204ENST00000575924 449 ntBASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.86■□□□□ 0.61
NPAS4Q8IUM7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 RHOQP3-201ENST00000437982 621 ntBASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 RFPL4AP1-201ENST00000530883 850 ntBASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS4Q8IUM7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 CYMP-203ENST00000474680 1263 ntBASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 AP000974.1-201ENST00000623909 2387 ntBASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS4Q8IUM7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NPAS4Q8IUM7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms