Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 B2M-204ENST00000558401 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.849e-10■□□□□ 10.2
LARP4Q71RC2 B2M-212ENST00000561424 604 ntTSL 38.17□□□□□ -1.19e-10■□□□□ 10.2
LARP4Q71RC2 B2M-206ENST00000559720 1220 ntTSL 58.15□□□□□ -1.19e-10■□□□□ 10.2
LARP4Q71RC2 B2M-211ENST00000561139 717 ntTSL 36.25□□□□□ -1.419e-10■□□□□ 10.2
LARP4Q71RC2 B2M-205ENST00000559220 580 ntTSL 56.17□□□□□ -1.429e-10■□□□□ 10.2
LARP4Q71RC2 B2M-201ENST00000349264 732 ntTSL 36.08□□□□□ -1.449e-10■□□□□ 10.2
LARP4Q71RC2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.372e-23■□□□□ 10.2
LARP4Q71RC2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.132e-23■□□□□ 10.2
LARP4Q71RC2 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC12.17□□□□□ -0.462e-23■□□□□ 10.2
LARP4Q71RC2 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC11.98□□□□□ -0.492e-23■□□□□ 10.2
LARP4Q71RC2 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC9.98□□□□□ -0.812e-23■□□□□ 10.2
LARP4Q71RC2 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC9.86□□□□□ -0.832e-23■□□□□ 10.2
LARP4Q71RC2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.48□□□□□ -0.095e-9■□□□□ 10.2
LARP4Q71RC2 SPCS1-204ENST00000474945 981 ntTSL 212.45□□□□□ -0.425e-9■□□□□ 10.2
LARP4Q71RC2 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC12.13□□□□□ -0.475e-9■□□□□ 10.2
LARP4Q71RC2 SPCS1-205ENST00000602728 832 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.975e-9■□□□□ 10.2
LARP4Q71RC2 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC7.64□□□□□ -1.195e-9■□□□□ 10.2
LARP4Q71RC2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.181e-7■□□□□ 10.1
LARP4Q71RC2 ASPSCR1-213ENST00000582355 1246 ntTSL 521.64■■□□□ 1.052e-6■□□□□ 10.1
LARP4Q71RC2 TMEM259-210ENST00000592618 1877 ntTSL 524.19■■□□□ 1.462e-13■□□□□ 10.1
LARP4Q71RC2 TMEM259-208ENST00000592052 1637 nt23.33■■□□□ 1.322e-13■□□□□ 10.1
LARP4Q71RC2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.112e-13■□□□□ 10.1
LARP4Q71RC2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.022e-13■□□□□ 10.1
LARP4Q71RC2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.42■□□□□ 0.72e-13■□□□□ 10.1
LARP4Q71RC2 TMEM259-205ENST00000586704 2538 ntTSL 517.83■□□□□ 0.442e-13■□□□□ 10.1
LARP4Q71RC2 TMEM259-211ENST00000593068 1965 ntTSL 517.7■□□□□ 0.422e-13■□□□□ 10.1
LARP4Q71RC2 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.61■□□□□ 0.571e-10■□□□□ 10.1
LARP4Q71RC2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.551e-10■□□□□ 10.1
LARP4Q71RC2 PTBP1-209ENST00000586481 578 ntTSL 318.17■□□□□ 0.51e-10■□□□□ 10.1
LARP4Q71RC2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.79■□□□□ 0.441e-10■□□□□ 10.1
LARP4Q71RC2 RER1-208ENST00000493207 686 ntTSL 215.71■□□□□ 0.111e-10■□□□□ 10.1
LARP4Q71RC2 PTBP1-216ENST00000590887 642 ntTSL 312.59□□□□□ -0.391e-10■□□□□ 10.1
LARP4Q71RC2 PTBP1-214ENST00000589575 749 ntTSL 311.96□□□□□ -0.491e-10■□□□□ 10.1
LARP4Q71RC2 PTBP1-211ENST00000587094 273 ntTSL 310.46□□□□□ -0.731e-10■□□□□ 10.1
LARP4Q71RC2 ANKRD10-211ENST00000603993 704 ntTSL 28.66□□□□□ -1.021e-10■□□□□ 10.1
LARP4Q71RC2 ANKRD10-209ENST00000489973 745 ntTSL 38.18□□□□□ -1.11e-10■□□□□ 10.1
LARP4Q71RC2 ANKRD10-208ENST00000485844 641 ntTSL 27.33□□□□□ -1.241e-10■□□□□ 10.1
LARP4Q71RC2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.311e-7■□□□□ 10.1
LARP4Q71RC2 AMFR-208ENST00000566757 1844 nt15.61■□□□□ 0.091e-7■□□□□ 10.1
LARP4Q71RC2 AMFR-202ENST00000492830 2249 ntTSL 213.33□□□□□ -0.281e-7■□□□□ 10.1
LARP4Q71RC2 AMFR-210ENST00000568325 1230 ntTSL 212.24□□□□□ -0.451e-7■□□□□ 10.1
LARP4Q71RC2 WDR74-208ENST00000538098 548 ntTSL 416.07■□□□□ 0.161e-29■□□□□ 10.1
LARP4Q71RC2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.161e-29■□□□□ 10.1
LARP4Q71RC2 RNU2-2P-201ENST00000410396 191 ntBASIC2.9□□□□□ -1.951e-29■□□□□ 10.1
LARP4Q71RC2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.25■□□□□ 0.191e-7■□□□□ 10.1
LARP4Q71RC2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.11e-7■□□□□ 10.1
LARP4Q71RC2 CHCHD3-202ENST00000423635 1310 ntTSL 1 (best)15□□□□□ -0.011e-7■□□□□ 10.1
LARP4Q71RC2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.123e-9■□□□□ 10.1
LARP4Q71RC2 LRP10-202ENST00000470660 486 ntTSL 313.98□□□□□ -0.173e-6■□□□□ 10.1
LARP4Q71RC2 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.38□□□□□ -0.273e-9■□□□□ 10.1
LARP4Q71RC2 AC008038.1-201ENST00000634247 1314 ntBASIC12.45□□□□□ -0.421e-7■□□□□ 10.1
LARP4Q71RC2 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.99□□□□□ -1.293e-9■□□□□ 10.1
LARP4Q71RC2 CHCHD3-206ENST00000496427 721 ntTSL 56.2□□□□□ -1.421e-7■□□□□ 10.1
LARP4Q71RC2 CHCHD3-205ENST00000481152 1367 ntTSL 25.86□□□□□ -1.471e-7■□□□□ 10.1
LARP4Q71RC2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.264e-6■□□□□ 10.1
LARP4Q71RC2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.134e-6■□□□□ 10.1
LARP4Q71RC2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.984e-6■□□□□ 10.1
LARP4Q71RC2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.364e-6■□□□□ 10.1
LARP4Q71RC2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.054e-6■□□□□ 10.1
LARP4Q71RC2 RPL14-204ENST00000435633 966 ntTSL 219.53■□□□□ 0.721e-11■□□□□ 10.1
LARP4Q71RC2 RPL14-203ENST00000416518 812 ntTSL 3 BASIC11.01□□□□□ -0.651e-11■□□□□ 10.1
LARP4Q71RC2 DEK-207ENST00000515742 661 ntTSL 221.54■■□□□ 1.041e-8■□□□□ 10.1
LARP4Q71RC2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.91□□□□□ -0.021e-8■□□□□ 10.1
LARP4Q71RC2 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.181e-8■□□□□ 10.1
LARP4Q71RC2 DEK-204ENST00000505224 1372 ntTSL 213.6□□□□□ -0.231e-8■□□□□ 10.1
LARP4Q71RC2 DEK-203ENST00000503715 580 ntTSL 512.37□□□□□ -0.431e-8■□□□□ 10.1
LARP4Q71RC2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.251e-7■□□□□ 10.1
LARP4Q71RC2 POM121C-207ENST00000614583 4073 ntTSL 213.75□□□□□ -0.211e-7■□□□□ 10.1
LARP4Q71RC2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.953e-6■□□□□ 10.1
LARP4Q71RC2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.913e-6■□□□□ 10.1
LARP4Q71RC2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.823e-6■□□□□ 10.1
LARP4Q71RC2 TTYH1-215ENST00000487134 2692 ntTSL 1 (best)19.9■□□□□ 0.783e-6■□□□□ 10.1
LARP4Q71RC2 TTYH1-216ENST00000489425 1240 ntTSL 1 (best)16.94■□□□□ 0.33e-6■□□□□ 10.1
LARP4Q71RC2 TTYH1-211ENST00000467939 552 ntTSL 1 (best)14.21□□□□□ -0.133e-6■□□□□ 10.1
LARP4Q71RC2 TTYH1-217ENST00000492920 757 ntTSL 211.26□□□□□ -0.613e-6■□□□□ 10.1
LARP4Q71RC2 RPL38-207ENST00000534490 429 ntAPPRIS ALT1 TSL 2 BASIC9.54□□□□□ -0.883e-30■□□□□ 10.1
LARP4Q71RC2 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC7.04□□□□□ -1.284e-7■□□□□ 10.1
LARP4Q71RC2 SMC4-223ENST00000493695 457 ntTSL 26.7□□□□□ -1.341e-17■□□□□ 10.1
LARP4Q71RC2 SMC4-203ENST00000462668 4235 ntTSL 23.35□□□□□ -1.871e-17■□□□□ 10.1
LARP4Q71RC2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.05■□□□□ 0.322e-6■□□□□ 10.1
LARP4Q71RC2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.212e-6■□□□□ 10.1
LARP4Q71RC2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.89■□□□□ 0.132e-6■□□□□ 10.1
LARP4Q71RC2 UCKL1-207ENST00000632800 1530 ntTSL 514.41□□□□□ -0.12e-6■□□□□ 10.1
LARP4Q71RC2 GLG1-213ENST00000567951 2918 ntTSL 1 (best)18.89■□□□□ 0.615e-10■□□□□ 10.1
LARP4Q71RC2 GLG1-206ENST00000562090 4037 ntTSL 214.25□□□□□ -0.135e-10■□□□□ 10.1
LARP4Q71RC2 AL590867.2-201ENST00000492974 447 ntBASIC8.56□□□□□ -1.042e-6■□□□□ 10.1
LARP4Q71RC2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.048e-25■□□□□ 10.1
LARP4Q71RC2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.963e-8■□□□□ 10.1
LARP4Q71RC2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.744e-9■□□□□ 10.1
LARP4Q71RC2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.753e-8■□□□□ 10.1
LARP4Q71RC2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.73e-8■□□□□ 10.1
LARP4Q71RC2 VPS51-204ENST00000527646 2144 ntTSL 1 (best)18.49■□□□□ 0.553e-8■□□□□ 10.1
LARP4Q71RC2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.393e-8■□□□□ 10.1
LARP4Q71RC2 VPS51-216ENST00000534591 1503 ntTSL 516.63■□□□□ 0.253e-8■□□□□ 10.1
LARP4Q71RC2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.254e-9■□□□□ 10.1
LARP4Q71RC2 VPS51-208ENST00000530673 633 ntTSL 515.83■□□□□ 0.123e-8■□□□□ 10.1
LARP4Q71RC2 VPS51-213ENST00000533827 1078 ntTSL 315.83■□□□□ 0.123e-8■□□□□ 10.1
LARP4Q71RC2 GLT8D1-202ENST00000394783 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.033e-8■□□□□ 10.1
LARP4Q71RC2 GLT8D1-209ENST00000481643 796 ntTSL 36.69□□□□□ -1.343e-8■□□□□ 10.1
LARP4Q71RC2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.5■□□□□ 0.558e-7■□□□□ 10.1
Retrieved 100 of 15,922 protein–RNA pairs in 223.1 ms