Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00575Q6W349 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC00575Q6W349 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC00575Q6W349 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00575Q6W349 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00575Q6W349 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00575Q6W349 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00575Q6W349 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00575Q6W349 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 AC005915.1-201ENST00000624912 2018 ntBASIC11.23□□□□□ -0.61
LINC00575Q6W349 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 METTL15-202ENST00000403099 795 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 AC009065.1-201ENST00000564055 1225 ntBASIC11.23□□□□□ -0.61
LINC00575Q6W349 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00575Q6W349 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00575Q6W349 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 MST1L-201ENST00000442552 2185 ntBASIC11.22□□□□□ -0.61
LINC00575Q6W349 GPAT2P1-201ENST00000444924 1672 ntBASIC11.22□□□□□ -0.61
LINC00575Q6W349 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 AC036111.1-201ENST00000533973 1582 ntBASIC11.22□□□□□ -0.61
LINC00575Q6W349 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 TK2-208ENST00000545043 1120 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 MIR4758-201ENST00000577688 71 ntBASIC11.22□□□□□ -0.61
LINC00575Q6W349 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 AL513477.1-201ENST00000602865 2407 ntBASIC11.22□□□□□ -0.61
LINC00575Q6W349 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00575Q6W349 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00575Q6W349 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms