Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM88Q6PEY1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 AC105020.6-201ENST00000621523 1217 ntBASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM88Q6PEY1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 AC099063.4-201ENST00000641099 1602 ntBASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 AC087633.2-202ENST00000565166 1439 ntBASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM88Q6PEY1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 ABHD17AP1-201ENST00000358206 933 ntBASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 MIR4651-201ENST00000582622 73 ntBASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM88Q6PEY1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms