Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 MIR4785-201ENST00000585005 73 ntBASIC17.1■□□□□ 0.33
RNF220Q5VTB9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF220Q5VTB9 CROCCP1-201ENST00000426910 5675 ntBASIC17.1■□□□□ 0.33
RNF220Q5VTB9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 UNC93B2-201ENST00000285383 730 ntBASIC17.09■□□□□ 0.33
RNF220Q5VTB9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 AC034236.2-201ENST00000606662 1610 ntBASIC17.09■□□□□ 0.33
RNF220Q5VTB9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
RNF220Q5VTB9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
RNF220Q5VTB9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF220Q5VTB9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.08■□□□□ 0.33
RNF220Q5VTB9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF220Q5VTB9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF220Q5VTB9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF220Q5VTB9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF220Q5VTB9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.33
RNF220Q5VTB9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 SLC25A1P2-201ENST00000430693 912 ntBASIC17.08■□□□□ 0.32
RNF220Q5VTB9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 RBM17P1-201ENST00000453646 1190 ntBASIC17.08■□□□□ 0.32
RNF220Q5VTB9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 MIR3180-5-201ENST00000583743 153 ntBASIC17.08■□□□□ 0.32
RNF220Q5VTB9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF220Q5VTB9 TSPY26P-202ENST00000565928 3884 ntBASIC17.08■□□□□ 0.32
RNF220Q5VTB9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms