Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL20P78556 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL20P78556 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.96□□□□□ -0.18
CCL20P78556 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CCL20P78556 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CCL20P78556 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL20P78556 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL20P78556 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL20P78556 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL20P78556 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.96□□□□□ -0.18
CCL20P78556 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CCL20P78556 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL20P78556 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL20P78556 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 AC132938.6-201ENST00000623828 1655 ntBASIC13.95□□□□□ -0.18
CCL20P78556 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCL20P78556 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL20P78556 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL20P78556 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CCL20P78556 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
CCL20P78556 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL20P78556 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL20P78556 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL20P78556 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL20P78556 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.95□□□□□ -0.18
CCL20P78556 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL20P78556 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL20P78556 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL20P78556 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL20P78556 AC105036.2-201ENST00000569468 176 ntBASIC13.95□□□□□ -0.18
CCL20P78556 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL20P78556 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL20P78556 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL20P78556 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL20P78556 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCL20P78556 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL20P78556 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CCL20P78556 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCL20P78556 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL20P78556 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CCL20P78556 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL20P78556 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 NBPF21P-201ENST00000425093 1451 ntBASIC13.94□□□□□ -0.18
CCL20P78556 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL20P78556 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL20P78556 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL20P78556 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CCL20P78556 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CCL20P78556 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.94□□□□□ -0.18
CCL20P78556 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL20P78556 AC034268.1-201ENST00000441047 882 ntBASIC13.94□□□□□ -0.18
CCL20P78556 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL20P78556 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL20P78556 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL20P78556 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL20P78556 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CCL20P78556 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms