Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.9■□□□□ 0.62
MCCD1P59942 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.9■□□□□ 0.62
MCCD1P59942 AC079776.2-201ENST00000641154 1609 ntBASIC18.9■□□□□ 0.62
MCCD1P59942 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MCCD1P59942 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.9■□□□□ 0.62
MCCD1P59942 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.9■□□□□ 0.62
MCCD1P59942 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MCCD1P59942 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.9■□□□□ 0.62
MCCD1P59942 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.9■□□□□ 0.62
MCCD1P59942 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
MCCD1P59942 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
MCCD1P59942 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MCCD1P59942 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.89■□□□□ 0.61
MCCD1P59942 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.89■□□□□ 0.61
MCCD1P59942 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MCCD1P59942 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MCCD1P59942 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.89■□□□□ 0.61
MCCD1P59942 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MCCD1P59942 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.89■□□□□ 0.61
MCCD1P59942 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MCCD1P59942 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.89■□□□□ 0.61
MCCD1P59942 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MCCD1P59942 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
MCCD1P59942 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.89■□□□□ 0.61
MCCD1P59942 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.89■□□□□ 0.61
MCCD1P59942 MIR3652-201ENST00000579335 131 ntBASIC18.89■□□□□ 0.61
MCCD1P59942 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.89■□□□□ 0.61
MCCD1P59942 AL591684.3-201ENST00000605187 298 ntBASIC18.89■□□□□ 0.61
MCCD1P59942 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MCCD1P59942 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.89■□□□□ 0.61
MCCD1P59942 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
MCCD1P59942 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MCCD1P59942 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.89■□□□□ 0.61
MCCD1P59942 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MCCD1P59942 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.89■□□□□ 0.61
MCCD1P59942 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MCCD1P59942 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.89■□□□□ 0.61
MCCD1P59942 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
MCCD1P59942 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MCCD1P59942 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.88■□□□□ 0.61
MCCD1P59942 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.88■□□□□ 0.61
MCCD1P59942 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.88■□□□□ 0.61
MCCD1P59942 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.88■□□□□ 0.61
MCCD1P59942 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.88■□□□□ 0.61
MCCD1P59942 AC132008.2-207ENST00000454517 770 ntBASIC18.88■□□□□ 0.61
MCCD1P59942 STK19B-204ENST00000512515 211 ntBASIC18.88■□□□□ 0.61
MCCD1P59942 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.88■□□□□ 0.61
MCCD1P59942 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.88■□□□□ 0.61
MCCD1P59942 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.88■□□□□ 0.61
MCCD1P59942 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.88■□□□□ 0.61
MCCD1P59942 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.88■□□□□ 0.61
MCCD1P59942 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 AL135999.2-201ENST00000622438 1686 ntBASIC18.88■□□□□ 0.61
MCCD1P59942 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MCCD1P59942 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
MCCD1P59942 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MCCD1P59942 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.87■□□□□ 0.61
MCCD1P59942 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
MCCD1P59942 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MCCD1P59942 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MCCD1P59942 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.87■□□□□ 0.61
MCCD1P59942 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 HCG4P8-203ENST00000443049 980 ntBASIC18.87■□□□□ 0.61
MCCD1P59942 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MCCD1P59942 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms