Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.42■□□□□ 0.22
PER3P56645 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.42■□□□□ 0.22
PER3P56645 AL161938.1-201ENST00000569833 2180 ntBASIC16.42■□□□□ 0.22
PER3P56645 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PER3P56645 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 PCDHA12-202ENST00000613593 2588 ntBASIC16.41■□□□□ 0.22
PER3P56645 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.41■□□□□ 0.22
PER3P56645 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
PER3P56645 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PER3P56645 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.41■□□□□ 0.22
PER3P56645 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PER3P56645 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 BX842568.4-201ENST00000421222 227 ntBASIC16.41■□□□□ 0.22
PER3P56645 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.41■□□□□ 0.22
PER3P56645 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.41■□□□□ 0.22
PER3P56645 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.41■□□□□ 0.22
PER3P56645 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PER3P56645 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.41■□□□□ 0.22
PER3P56645 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PER3P56645 AC084018.2-201ENST00000613093 2607 ntBASIC16.41■□□□□ 0.22
PER3P56645 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PER3P56645 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PER3P56645 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.4■□□□□ 0.22
PER3P56645 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PER3P56645 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PER3P56645 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PER3P56645 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.4■□□□□ 0.22
PER3P56645 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.4■□□□□ 0.22
PER3P56645 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PER3P56645 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.4■□□□□ 0.22
PER3P56645 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.4■□□□□ 0.22
PER3P56645 AL591684.3-201ENST00000605187 298 ntBASIC16.4■□□□□ 0.22
PER3P56645 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PER3P56645 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.4■□□□□ 0.22
PER3P56645 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.4■□□□□ 0.22
PER3P56645 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.4■□□□□ 0.22
PER3P56645 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PER3P56645 ZNF259P1-201ENST00000407656 1365 ntBASIC16.39■□□□□ 0.21
PER3P56645 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.39■□□□□ 0.21
PER3P56645 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 SIRPAP1-201ENST00000448467 1770 ntBASIC16.39■□□□□ 0.21
PER3P56645 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms