Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.33■□□□□ 0.37
CDH13P55290 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.33■□□□□ 0.37
CDH13P55290 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CDH13P55290 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH13P55290 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH13P55290 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CDH13P55290 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
CDH13P55290 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 HLA-F-220ENST00000434407 884 ntBASIC17.33■□□□□ 0.36
CDH13P55290 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.33■□□□□ 0.36
CDH13P55290 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH13P55290 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH13P55290 AC139887.4-201ENST00000607877 719 ntBASIC17.33■□□□□ 0.36
CDH13P55290 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDH13P55290 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDH13P55290 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDH13P55290 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDH13P55290 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH13P55290 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH13P55290 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDH13P55290 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CDH13P55290 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDH13P55290 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH13P55290 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 DDX43P3-201ENST00000441064 443 ntBASIC17.32■□□□□ 0.36
CDH13P55290 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CDH13P55290 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH13P55290 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CDH13P55290 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH13P55290 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CDH13P55290 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDH13P55290 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDH13P55290 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH13P55290 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDH13P55290 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH13P55290 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH13P55290 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CDH13P55290 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.31■□□□□ 0.36
CDH13P55290 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH13P55290 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDH13P55290 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDH13P55290 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH13P55290 STARP1-201ENST00000397973 869 ntBASIC17.31■□□□□ 0.36
CDH13P55290 TSPY12P-201ENST00000421279 868 ntBASIC17.31■□□□□ 0.36
CDH13P55290 AL137013.1-201ENST00000432946 1228 ntBASIC17.31■□□□□ 0.36
CDH13P55290 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 YBX1P2-201ENST00000489612 999 ntBASIC17.31■□□□□ 0.36
CDH13P55290 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CDH13P55290 AC009154.2-201ENST00000621177 724 ntBASIC17.31■□□□□ 0.36
CDH13P55290 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.31■□□□□ 0.36
CDH13P55290 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH13P55290 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH13P55290 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms