Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.11□□□□□ -0.47
PCP4P48539 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC12.11□□□□□ -0.47
PCP4P48539 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.11□□□□□ -0.47
PCP4P48539 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PCP4P48539 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.11□□□□□ -0.47
PCP4P48539 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
PCP4P48539 PCDHB17P-202ENST00000623466 3066 ntBASIC12.11□□□□□ -0.47
PCP4P48539 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PCP4P48539 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 VGF-203ENST00000611537 1622 ntTSL 5 BASIC12.11□□□□□ -0.47
PCP4P48539 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
PCP4P48539 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PCP4P48539 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PCP4P48539 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PCP4P48539 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.1□□□□□ -0.47
PCP4P48539 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.1□□□□□ -0.47
PCP4P48539 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PCP4P48539 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.1□□□□□ -0.47
PCP4P48539 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PCP4P48539 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
PCP4P48539 AC013268.4-201ENST00000637413 2228 ntBASIC12.1□□□□□ -0.47
PCP4P48539 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PCP4P48539 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.1□□□□□ -0.47
PCP4P48539 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.1□□□□□ -0.47
PCP4P48539 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PCP4P48539 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
PCP4P48539 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.1□□□□□ -0.47
PCP4P48539 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
PCP4P48539 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.1□□□□□ -0.47
PCP4P48539 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
PCP4P48539 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
PCP4P48539 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PCP4P48539 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
PCP4P48539 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
PCP4P48539 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.09□□□□□ -0.47
PCP4P48539 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.09□□□□□ -0.47
PCP4P48539 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.09□□□□□ -0.47
PCP4P48539 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.09□□□□□ -0.47
PCP4P48539 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.09□□□□□ -0.47
PCP4P48539 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
PCP4P48539 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms