Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-1P43699 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
NKX2-1P43699 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-1P43699 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-1P43699 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-1P43699 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-1P43699 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX2-1P43699 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NKX2-1P43699 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
NKX2-1P43699 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX2-1P43699 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
NKX2-1P43699 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.51□□□□□ -0.09
NKX2-1P43699 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
NKX2-1P43699 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 ESRRAP1-201ENST00000400596 1257 ntBASIC14.51□□□□□ -0.09
NKX2-1P43699 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.51□□□□□ -0.09
NKX2-1P43699 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.51□□□□□ -0.09
NKX2-1P43699 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.51□□□□□ -0.09
NKX2-1P43699 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 AC132938.6-201ENST00000623828 1655 ntBASIC14.51□□□□□ -0.09
NKX2-1P43699 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
NKX2-1P43699 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-1P43699 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-1P43699 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 FSCN1P1-201ENST00000568912 1481 ntBASIC14.5□□□□□ -0.09
NKX2-1P43699 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-1P43699 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-1P43699 AC096733.2-201ENST00000609937 1394 ntBASIC14.5□□□□□ -0.09
NKX2-1P43699 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-1P43699 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-1P43699 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NKX2-1P43699 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-1P43699 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-1P43699 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NKX2-1P43699 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NKX2-1P43699 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 CD99P1-205ENST00000527459 561 ntBASIC14.5□□□□□ -0.09
NKX2-1P43699 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-1P43699 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.5□□□□□ -0.09
NKX2-1P43699 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-1P43699 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.5□□□□□ -0.09
NKX2-1P43699 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.5□□□□□ -0.09
NKX2-1P43699 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-1P43699 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-1P43699 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NKX2-1P43699 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-1P43699 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-1P43699 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-1P43699 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms