Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.87■□□□□ 0.45
CHRNA4P43681 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.87■□□□□ 0.45
CHRNA4P43681 BX276092.7-203ENST00000637198 1536 ntBASIC17.87■□□□□ 0.45
CHRNA4P43681 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.87■□□□□ 0.45
CHRNA4P43681 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA4P43681 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 AC141586.5-201ENST00000624546 2050 ntBASIC17.86■□□□□ 0.45
CHRNA4P43681 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CHRNA4P43681 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.86■□□□□ 0.45
CHRNA4P43681 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA4P43681 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.86■□□□□ 0.45
CHRNA4P43681 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHRNA4P43681 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA4P43681 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.86■□□□□ 0.45
CHRNA4P43681 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA4P43681 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA4P43681 AC092119.3-201ENST00000612618 583 ntBASIC17.86■□□□□ 0.45
CHRNA4P43681 AC093458.2-201ENST00000623150 629 ntBASIC17.86■□□□□ 0.45
CHRNA4P43681 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA4P43681 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 AC233702.3-201ENST00000578656 1387 ntBASIC17.86■□□□□ 0.45
CHRNA4P43681 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA4P43681 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA4P43681 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 HLA-J-201ENST00000462773 1622 ntBASIC17.86■□□□□ 0.45
CHRNA4P43681 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA4P43681 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CHRNA4P43681 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
CHRNA4P43681 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CHRNA4P43681 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 DRAXINP1-201ENST00000437611 948 ntBASIC17.85■□□□□ 0.45
CHRNA4P43681 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA4P43681 LINC00265-3P-201ENST00000447588 903 ntBASIC17.85■□□□□ 0.45
CHRNA4P43681 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA4P43681 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA4P43681 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA4P43681 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA4P43681 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.85■□□□□ 0.45
CHRNA4P43681 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHRNA4P43681 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA4P43681 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA4P43681 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA4P43681 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHRNA4P43681 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA4P43681 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA4P43681 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CHRNA4P43681 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA4P43681 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA4P43681 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA4P43681 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHRNA4P43681 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA4P43681 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA4P43681 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CHRNA4P43681 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA4P43681 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHRNA4P43681 LTB4R2-202ENST00000528054 3092 ntBASIC17.84■□□□□ 0.45
CHRNA4P43681 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA4P43681 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA4P43681 AC097374.2-201ENST00000618617 1306 ntBASIC17.84■□□□□ 0.45
CHRNA4P43681 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHRNA4P43681 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.84■□□□□ 0.45
CHRNA4P43681 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA4P43681 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CHRNA4P43681 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.84■□□□□ 0.45
CHRNA4P43681 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA4P43681 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CHRNA4P43681 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHRNA4P43681 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.84■□□□□ 0.45
CHRNA4P43681 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA4P43681 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA4P43681 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA4P43681 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA4P43681 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CHRNA4P43681 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CHRNA4P43681 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CHRNA4P43681 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CHRNA4P43681 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA4P43681 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA4P43681 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms