Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20■□□□□ 0.79
PRPHP41219 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRPHP41219 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRPHP41219 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PRPHP41219 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRPHP41219 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.99■□□□□ 0.79
PRPHP41219 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPHP41219 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPHP41219 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.99■□□□□ 0.79
PRPHP41219 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PRPHP41219 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.99■□□□□ 0.79
PRPHP41219 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PRPHP41219 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.99■□□□□ 0.79
PRPHP41219 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PRPHP41219 Z69720.1-201ENST00000601483 472 ntBASIC19.99■□□□□ 0.79
PRPHP41219 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PRPHP41219 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.99■□□□□ 0.79
PRPHP41219 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPHP41219 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.99■□□□□ 0.79
PRPHP41219 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRPHP41219 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PRPHP41219 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.98■□□□□ 0.79
PRPHP41219 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.98■□□□□ 0.79
PRPHP41219 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.98■□□□□ 0.79
PRPHP41219 TOB2P1-201ENST00000469761 992 ntBASIC19.98■□□□□ 0.79
PRPHP41219 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.98■□□□□ 0.79
PRPHP41219 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.98■□□□□ 0.79
PRPHP41219 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.98■□□□□ 0.79
PRPHP41219 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.98■□□□□ 0.79
PRPHP41219 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.98■□□□□ 0.79
PRPHP41219 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.98■□□□□ 0.79
PRPHP41219 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.98■□□□□ 0.79
PRPHP41219 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.98■□□□□ 0.79
PRPHP41219 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.98■□□□□ 0.79
PRPHP41219 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PRPHP41219 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRPHP41219 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PRPHP41219 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.97■□□□□ 0.79
PRPHP41219 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.97■□□□□ 0.79
PRPHP41219 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PRPHP41219 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.97■□□□□ 0.79
PRPHP41219 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.97■□□□□ 0.79
PRPHP41219 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.97■□□□□ 0.79
PRPHP41219 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRPHP41219 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PRPHP41219 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.96■□□□□ 0.79
PRPHP41219 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPHP41219 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPHP41219 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.96■□□□□ 0.79
PRPHP41219 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPHP41219 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.96■□□□□ 0.79
PRPHP41219 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.96■□□□□ 0.79
PRPHP41219 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPHP41219 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPHP41219 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPHP41219 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPHP41219 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPHP41219 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.96■□□□□ 0.79
PRPHP41219 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPHP41219 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRPHP41219 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms