Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
COL8A2P25067 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.95□□□□□ -0.02
COL8A2P25067 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COL8A2P25067 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.95□□□□□ -0.02
COL8A2P25067 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COL8A2P25067 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.95□□□□□ -0.02
COL8A2P25067 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.95□□□□□ -0.02
COL8A2P25067 KRT18P67-201ENST00000432816 1264 ntBASIC14.95□□□□□ -0.02
COL8A2P25067 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
COL8A2P25067 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.95□□□□□ -0.02
COL8A2P25067 AP001005.1-201ENST00000571755 1248 ntBASIC14.95□□□□□ -0.02
COL8A2P25067 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.95□□□□□ -0.02
COL8A2P25067 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
COL8A2P25067 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL8A2P25067 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COL8A2P25067 AC100803.2-201ENST00000562459 1963 ntBASIC14.94□□□□□ -0.02
COL8A2P25067 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
COL8A2P25067 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 AP000997.3-201ENST00000623333 2250 ntBASIC14.94□□□□□ -0.02
COL8A2P25067 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.94□□□□□ -0.02
COL8A2P25067 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.94□□□□□ -0.02
COL8A2P25067 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.94□□□□□ -0.02
COL8A2P25067 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 AL031284.1-201ENST00000419297 478 ntBASIC14.94□□□□□ -0.02
COL8A2P25067 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.94□□□□□ -0.02
COL8A2P25067 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.94□□□□□ -0.02
COL8A2P25067 SCARNA2-201ENST00000458748 420 ntBASIC14.94□□□□□ -0.02
COL8A2P25067 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.94□□□□□ -0.02
COL8A2P25067 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.94□□□□□ -0.02
COL8A2P25067 RNA5SP419-201ENST00000515908 135 ntBASIC14.94□□□□□ -0.02
COL8A2P25067 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.94□□□□□ -0.02
COL8A2P25067 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COL8A2P25067 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.94□□□□□ -0.02
COL8A2P25067 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.94□□□□□ -0.02
COL8A2P25067 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.94□□□□□ -0.02
COL8A2P25067 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.94□□□□□ -0.02
COL8A2P25067 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COL8A2P25067 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 BCL2-203ENST00000589955 5011 ntBASIC14.94□□□□□ -0.02
COL8A2P25067 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
COL8A2P25067 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.94□□□□□ -0.02
COL8A2P25067 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COL8A2P25067 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL8A2P25067 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
COL8A2P25067 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.93□□□□□ -0.02
COL8A2P25067 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.93□□□□□ -0.02
COL8A2P25067 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 AL354751.1-201ENST00000412768 1863 ntBASIC14.93□□□□□ -0.02
COL8A2P25067 BICD1-207ENST00000551848 1962 ntBASIC14.93□□□□□ -0.02
COL8A2P25067 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
COL8A2P25067 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
COL8A2P25067 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.93□□□□□ -0.02
COL8A2P25067 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.93□□□□□ -0.02
COL8A2P25067 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms