Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HOXC6P09630 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HOXC6P09630 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HOXC6P09630 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXC6P09630 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HOXC6P09630 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.88■□□□□ 0.77
HOXC6P09630 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXC6P09630 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC6P09630 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.88■□□□□ 0.77
HOXC6P09630 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HOXC6P09630 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXC6P09630 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC6P09630 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC6P09630 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC6P09630 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXC6P09630 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HOXC6P09630 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HOXC6P09630 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 BCAR1-209ENST00000546196 1340 ntBASIC19.87■□□□□ 0.77
HOXC6P09630 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.87■□□□□ 0.77
HOXC6P09630 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXC6P09630 AP000344.2-201ENST00000512987 629 ntBASIC19.87■□□□□ 0.77
HOXC6P09630 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXC6P09630 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
HOXC6P09630 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXC6P09630 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXC6P09630 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 AC120498.9-201ENST00000339021 3867 ntBASIC19.87■□□□□ 0.77
HOXC6P09630 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.87■□□□□ 0.77
HOXC6P09630 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXC6P09630 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC6P09630 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HOXC6P09630 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HOXC6P09630 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HOXC6P09630 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXC6P09630 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXC6P09630 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HOXC6P09630 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXC6P09630 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 STK19B-204ENST00000512515 211 ntBASIC19.86■□□□□ 0.77
HOXC6P09630 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.86■□□□□ 0.77
HOXC6P09630 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 AC009336.1-201ENST00000608941 1553 ntBASIC19.86■□□□□ 0.77
HOXC6P09630 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HOXC6P09630 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HOXC6P09630 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXC6P09630 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC6P09630 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HOXC6P09630 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXC6P09630 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
HOXC6P09630 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HOXC6P09630 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms