Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALDH1A1P00352 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALDH1A1P00352 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALDH1A1P00352 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 AC125807.1-201ENST00000483097 614 ntBASIC20.05■□□□□ 0.8
ALDH1A1P00352 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALDH1A1P00352 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ALDH1A1P00352 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALDH1A1P00352 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALDH1A1P00352 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALDH1A1P00352 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALDH1A1P00352 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALDH1A1P00352 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.04■□□□□ 0.8
ALDH1A1P00352 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALDH1A1P00352 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALDH1A1P00352 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ALDH1A1P00352 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ALDH1A1P00352 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALDH1A1P00352 ACTG1P4-201ENST00000425123 1122 ntBASIC20.04■□□□□ 0.8
ALDH1A1P00352 UGT1A2P-201ENST00000454886 866 ntBASIC20.04■□□□□ 0.8
ALDH1A1P00352 AC079140.1-201ENST00000508039 487 ntBASIC20.04■□□□□ 0.8
ALDH1A1P00352 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.04■□□□□ 0.8
ALDH1A1P00352 AC099522.2-201ENST00000607001 744 ntBASIC20.04■□□□□ 0.8
ALDH1A1P00352 AC116407.2-201ENST00000613639 860 ntBASIC20.04■□□□□ 0.8
ALDH1A1P00352 MIR6752-201ENST00000618442 71 ntBASIC20.04■□□□□ 0.8
ALDH1A1P00352 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALDH1A1P00352 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.04■□□□□ 0.8
ALDH1A1P00352 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALDH1A1P00352 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
ALDH1A1P00352 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.04■□□□□ 0.8
ALDH1A1P00352 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.04■□□□□ 0.8
ALDH1A1P00352 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.04■□□□□ 0.8
ALDH1A1P00352 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALDH1A1P00352 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALDH1A1P00352 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALDH1A1P00352 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALDH1A1P00352 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 AC140658.5-201ENST00000438532 169 ntBASIC20.03■□□□□ 0.8
ALDH1A1P00352 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 AL512638.1-201ENST00000457493 794 ntBASIC20.03■□□□□ 0.8
ALDH1A1P00352 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 SLC25A39P2-201ENST00000537614 270 ntBASIC20.03■□□□□ 0.8
ALDH1A1P00352 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALDH1A1P00352 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALDH1A1P00352 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALDH1A1P00352 AC007952.6-201ENST00000573168 2673 ntBASIC20.03■□□□□ 0.8
ALDH1A1P00352 AC003957.1-201ENST00000625108 2673 ntBASIC20.03■□□□□ 0.8
ALDH1A1P00352 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.03■□□□□ 0.8
ALDH1A1P00352 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALDH1A1P00352 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.02■□□□□ 0.8
ALDH1A1P00352 BX276092.7-203ENST00000637198 1536 ntBASIC20.02■□□□□ 0.8
ALDH1A1P00352 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ALDH1A1P00352 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.02■□□□□ 0.8
ALDH1A1P00352 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.02■□□□□ 0.8
ALDH1A1P00352 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.02■□□□□ 0.8
ALDH1A1P00352 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.02■□□□□ 0.8
ALDH1A1P00352 AP005018.1-201ENST00000525475 301 ntBASIC20.02■□□□□ 0.8
ALDH1A1P00352 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.02■□□□□ 0.8
ALDH1A1P00352 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.02■□□□□ 0.8
ALDH1A1P00352 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.02■□□□□ 0.8
ALDH1A1P00352 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms