Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNX3O60493 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.46■□□□□ 0.39
SNX3O60493 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX3O60493 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX3O60493 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX3O60493 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX3O60493 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX3O60493 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SNX3O60493 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
SNX3O60493 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.46■□□□□ 0.38
SNX3O60493 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.46■□□□□ 0.38
SNX3O60493 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SNX3O60493 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX3O60493 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SNX3O60493 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX3O60493 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX3O60493 LINC02012-201ENST00000608206 1725 ntBASIC17.45■□□□□ 0.38
SNX3O60493 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SNX3O60493 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SNX3O60493 SLC29A4P1-201ENST00000398760 971 ntBASIC17.45■□□□□ 0.38
SNX3O60493 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX3O60493 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNX3O60493 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.45■□□□□ 0.38
SNX3O60493 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.45■□□□□ 0.38
SNX3O60493 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX3O60493 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.45■□□□□ 0.38
SNX3O60493 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX3O60493 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNX3O60493 AL662844.4-201ENST00000606367 2838 ntBASIC17.45■□□□□ 0.38
SNX3O60493 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.45■□□□□ 0.38
SNX3O60493 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX3O60493 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX3O60493 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX3O60493 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNX3O60493 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SNX3O60493 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SNX3O60493 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
SNX3O60493 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.44■□□□□ 0.38
SNX3O60493 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SNX3O60493 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNX3O60493 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX3O60493 DDX43P3-201ENST00000441064 443 ntBASIC17.44■□□□□ 0.38
SNX3O60493 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX3O60493 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.44■□□□□ 0.38
SNX3O60493 AC009065.1-201ENST00000564055 1225 ntBASIC17.44■□□□□ 0.38
SNX3O60493 AC026271.3-201ENST00000571884 352 ntBASIC17.44■□□□□ 0.38
SNX3O60493 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.44■□□□□ 0.38
SNX3O60493 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNX3O60493 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX3O60493 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX3O60493 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX3O60493 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SNX3O60493 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX3O60493 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.43■□□□□ 0.38
SNX3O60493 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SNX3O60493 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX3O60493 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms