Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
IDH3BO43837 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3BO43837 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3BO43837 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3BO43837 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3BO43837 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.31■□□□□ 0.2
IDH3BO43837 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3BO43837 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3BO43837 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3BO43837 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3BO43837 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.31■□□□□ 0.2
IDH3BO43837 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.3■□□□□ 0.2
IDH3BO43837 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
IDH3BO43837 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.3■□□□□ 0.2
IDH3BO43837 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
IDH3BO43837 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
IDH3BO43837 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.3■□□□□ 0.2
IDH3BO43837 AC008550.1-201ENST00000511500 884 ntBASIC16.3■□□□□ 0.2
IDH3BO43837 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
IDH3BO43837 AL512604.3-201ENST00000569583 964 ntBASIC16.3■□□□□ 0.2
IDH3BO43837 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.3■□□□□ 0.2
IDH3BO43837 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
IDH3BO43837 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.3■□□□□ 0.2
IDH3BO43837 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.3■□□□□ 0.2
IDH3BO43837 AC022211.2-201ENST00000585075 2527 ntBASIC16.3■□□□□ 0.2
IDH3BO43837 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.3■□□□□ 0.2
IDH3BO43837 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3BO43837 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.3■□□□□ 0.2
IDH3BO43837 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.29■□□□□ 0.2
IDH3BO43837 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3BO43837 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
IDH3BO43837 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IDH3BO43837 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3BO43837 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IDH3BO43837 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 KRT17P2-201ENST00000300992 1314 ntBASIC16.29■□□□□ 0.2
IDH3BO43837 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.29■□□□□ 0.2
IDH3BO43837 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3BO43837 EGLN1P1-201ENST00000531623 762 ntBASIC16.29■□□□□ 0.2
IDH3BO43837 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3BO43837 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.29■□□□□ 0.2
IDH3BO43837 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.29■□□□□ 0.2
IDH3BO43837 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.29■□□□□ 0.2
IDH3BO43837 AC010240.3-201ENST00000607688 395 ntBASIC16.29■□□□□ 0.2
IDH3BO43837 AP000525.1-201ENST00000608286 694 ntBASIC16.29■□□□□ 0.2
IDH3BO43837 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
IDH3BO43837 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IDH3BO43837 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3BO43837 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.29■□□□□ 0.2
IDH3BO43837 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3BO43837 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
IDH3BO43837 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3BO43837 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IDH3BO43837 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3BO43837 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3BO43837 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.28■□□□□ 0.2
IDH3BO43837 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3BO43837 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3BO43837 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
IDH3BO43837 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3BO43837 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
IDH3BO43837 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3BO43837 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
IDH3BO43837 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3BO43837 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
IDH3BO43837 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
IDH3BO43837 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3BO43837 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms