Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCRL2O00421 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCRL2O00421 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCRL2O00421 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCRL2O00421 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCRL2O00421 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCRL2O00421 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCRL2O00421 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCRL2O00421 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CCRL2O00421 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCRL2O00421 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.97■□□□□ 0.15
CCRL2O00421 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCRL2O00421 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCRL2O00421 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCRL2O00421 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.97■□□□□ 0.15
CCRL2O00421 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCRL2O00421 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
CCRL2O00421 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCRL2O00421 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.96■□□□□ 0.15
CCRL2O00421 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.96■□□□□ 0.15
CCRL2O00421 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCRL2O00421 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.96■□□□□ 0.15
CCRL2O00421 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.96■□□□□ 0.15
CCRL2O00421 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.96■□□□□ 0.15
CCRL2O00421 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.96■□□□□ 0.15
CCRL2O00421 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
CCRL2O00421 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.96■□□□□ 0.15
CCRL2O00421 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.96■□□□□ 0.15
CCRL2O00421 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.96■□□□□ 0.15
CCRL2O00421 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.96■□□□□ 0.15
CCRL2O00421 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCRL2O00421 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCRL2O00421 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCRL2O00421 AL603756.1-201ENST00000606511 2163 ntBASIC15.96■□□□□ 0.14
CCRL2O00421 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
CCRL2O00421 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.96■□□□□ 0.14
CCRL2O00421 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CCRL2O00421 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCRL2O00421 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.95■□□□□ 0.14
CCRL2O00421 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCRL2O00421 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.95■□□□□ 0.14
CCRL2O00421 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCRL2O00421 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 AC026366.1-201ENST00000488803 879 ntBASIC15.95■□□□□ 0.14
CCRL2O00421 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.95■□□□□ 0.14
CCRL2O00421 CD99P1-205ENST00000527459 561 ntBASIC15.95■□□□□ 0.14
CCRL2O00421 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.95■□□□□ 0.14
CCRL2O00421 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 LINC01451-201ENST00000623792 534 ntBASIC15.95■□□□□ 0.14
CCRL2O00421 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.95■□□□□ 0.14
CCRL2O00421 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 AC060834.1-201ENST00000443027 2032 ntBASIC15.95■□□□□ 0.14
CCRL2O00421 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.95■□□□□ 0.14
CCRL2O00421 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCRL2O00421 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCRL2O00421 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.94■□□□□ 0.14
CCRL2O00421 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCRL2O00421 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCRL2O00421 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCRL2O00421 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCRL2O00421 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCRL2O00421 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms