Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF25A6NGN4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF25A6NGN4 AL353692.3-201ENST00000407031 1396 ntBASIC16.62■□□□□ 0.25
PRAMEF25A6NGN4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF25A6NGN4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF25A6NGN4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF25A6NGN4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 AL138688.1-201ENST00000624851 1594 ntBASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 KRT8P26-201ENST00000534154 1276 ntBASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 AC069148.1-201ENST00000608741 768 ntBASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF25A6NGN4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PRAMEF25A6NGN4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 AC084018.2-201ENST00000613093 2607 ntBASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms