Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SYCE3A1L190 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SYCE3A1L190 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SYCE3A1L190 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.17■□□□□ 0.82
SYCE3A1L190 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SYCE3A1L190 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SYCE3A1L190 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.17■□□□□ 0.82
SYCE3A1L190 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.17■□□□□ 0.82
SYCE3A1L190 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
SYCE3A1L190 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYCE3A1L190 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.17■□□□□ 0.82
SYCE3A1L190 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 AC116353.5-201ENST00000638148 1699 ntBASIC20.16■□□□□ 0.82
SYCE3A1L190 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.16■□□□□ 0.82
SYCE3A1L190 AL391005.1-201ENST00000623953 2435 ntBASIC20.16■□□□□ 0.82
SYCE3A1L190 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.16■□□□□ 0.82
SYCE3A1L190 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SYCE3A1L190 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 AC092171.3-201ENST00000610122 2651 ntBASIC20.16■□□□□ 0.82
SYCE3A1L190 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SYCE3A1L190 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SYCE3A1L190 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 ESRRAP1-201ENST00000400596 1257 ntBASIC20.16■□□□□ 0.82
SYCE3A1L190 FAM197Y1-201ENST00000421178 764 ntBASIC20.16■□□□□ 0.82
SYCE3A1L190 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.16■□□□□ 0.82
SYCE3A1L190 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.16■□□□□ 0.82
SYCE3A1L190 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.16■□□□□ 0.82
SYCE3A1L190 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SYCE3A1L190 AC073648.6-201ENST00000641589 218 ntBASIC20.16■□□□□ 0.82
SYCE3A1L190 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.16■□□□□ 0.82
SYCE3A1L190 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.16■□□□□ 0.82
SYCE3A1L190 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SYCE3A1L190 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.16■□□□□ 0.82
SYCE3A1L190 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SYCE3A1L190 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SYCE3A1L190 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYCE3A1L190 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.15■□□□□ 0.82
SYCE3A1L190 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.15■□□□□ 0.82
SYCE3A1L190 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SYCE3A1L190 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SYCE3A1L190 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.15■□□□□ 0.82
SYCE3A1L190 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.15■□□□□ 0.82
SYCE3A1L190 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.15■□□□□ 0.82
SYCE3A1L190 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.15■□□□□ 0.82
SYCE3A1L190 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.15■□□□□ 0.82
SYCE3A1L190 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.15■□□□□ 0.82
SYCE3A1L190 DGCR10-201ENST00000609839 495 ntBASIC20.15■□□□□ 0.82
SYCE3A1L190 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SYCE3A1L190 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.15■□□□□ 0.82
SYCE3A1L190 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SYCE3A1L190 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.15■□□□□ 0.82
SYCE3A1L190 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.15■□□□□ 0.82
SYCE3A1L190 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.15■□□□□ 0.82
SYCE3A1L190 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SYCE3A1L190 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYCE3A1L190 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.15■□□□□ 0.82
SYCE3A1L190 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
SYCE3A1L190 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms