Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM28A0A1B0GU29 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 RPL13AP23-201ENST00000480739 586 ntBASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 AC092910.1-201ENST00000482027 1129 ntBASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 IGHV3-22-201ENST00000520721 359 ntBASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 AC105339.3-201ENST00000560043 636 ntBASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 AL671883.3-201ENST00000603274 991 ntBASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM28A0A1B0GU29 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 NEFHP1-201ENST00000412845 2629 ntBASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 STK19B-204ENST00000512515 211 ntBASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM28A0A1B0GU29 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 AP002414.3-201ENST00000589352 1468 ntBASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 SIGLEC30P-201ENST00000455569 941 ntBASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 AC106730.1-201ENST00000566722 1090 ntBASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SMIM28A0A1B0GU29 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms