Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 KRT18P65-201ENST00000439811 1286 ntBASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 MTCL1P1-201ENST00000446207 792 ntBASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 KRT16P4-201ENST00000453883 522 ntBASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 AC008687.5-201ENST00000593746 558 ntBASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 AC009154.2-201ENST00000621177 724 ntBASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 ABALON-201ENST00000629058 1903 ntBASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HRH3Q9Y5N1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 Z69720.1-201ENST00000601483 472 ntBASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 AL589935.2-201ENST00000616471 1231 ntBASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 AL390961.4-201ENST00000623958 2535 ntBASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HRH3Q9Y5N1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 NSUN5P1-202ENST00000421140 1535 ntBASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 NSUN5P2-203ENST00000457352 1529 ntBASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 AKR1C7P-201ENST00000305623 895 ntBASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HRH3Q9Y5N1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms