Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 AC012317.2-201ENST00000623305 2251 ntBASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 TSPY19P-201ENST00000418461 509 ntBASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 TSPY18P-201ENST00000441642 509 ntBASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 RN7SL510P-201ENST00000581311 263 ntBASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB6Q9Y5F9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 AL163051.1-201ENST00000569214 1512 ntBASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 AL499627.1-201ENST00000569373 2188 ntBASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 LINC00265-3P-201ENST00000447588 903 ntBASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 TOB2P1-201ENST00000469761 992 ntBASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 Z69720.1-201ENST00000601483 472 ntBASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGB6Q9Y5F9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 AC080080.1-201ENST00000625121 2420 ntBASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.77■□□□□ 0.27
PCDHGB6Q9Y5F9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 AC246785.2-201ENST00000432512 513 ntBASIC16.76■□□□□ 0.27
PCDHGB6Q9Y5F9 RN7SL606P-201ENST00000472779 293 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms