Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PCDHB9Q9Y5E1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB9Q9Y5E1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PCDHB9Q9Y5E1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB9Q9Y5E1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB9Q9Y5E1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
PCDHB9Q9Y5E1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.02■□□□□ 0.47
PCDHB9Q9Y5E1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 AL031284.1-201ENST00000419297 478 ntBASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 AC005336.2-201ENST00000593183 939 ntBASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 TERC-201ENST00000602385 541 ntBASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 KRT18P55-202ENST00000578578 1546 ntBASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB9Q9Y5E1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 MED22-202ENST00000371999 987 ntTSL 3 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 FAM220CP-201ENST00000395253 831 ntBASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB9Q9Y5E1 PMS2P7-201ENST00000506558 1336 ntBASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 POM121L3P-201ENST00000419331 1163 ntBASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 RNPS1P1-201ENST00000507437 918 ntBASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms