Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 AC145285.6-201ENST00000604632 637 ntBASIC20.84■□□□□ 0.93
SMC3Q9UQE7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 SLC25A3P1-201ENST00000443844 931 ntBASIC20.83■□□□□ 0.93
SMC3Q9UQE7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC3Q9UQE7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 AC099398.1-201ENST00000567919 2776 ntBASIC20.83■□□□□ 0.92
SMC3Q9UQE7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SMC3Q9UQE7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 AC087499.1-201ENST00000418141 1075 ntBASIC20.82■□□□□ 0.92
SMC3Q9UQE7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 AC004263.2-201ENST00000617183 678 ntBASIC20.82■□□□□ 0.92
SMC3Q9UQE7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SMC3Q9UQE7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 KRT18P48-201ENST00000434763 852 ntBASIC20.81■□□□□ 0.92
SMC3Q9UQE7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 AL441883.1-201ENST00000566170 1045 ntBASIC20.81■□□□□ 0.92
SMC3Q9UQE7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMC3Q9UQE7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms