Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 ELK2BP-201ENST00000415014 1224 ntBASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CYP39A1Q9NYL5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 NCF1C-201ENST00000438382 1427 ntBASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 SIGLEC30P-201ENST00000455569 941 ntBASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 AC108751.1-201ENST00000490852 363 ntBASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CYP39A1Q9NYL5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 RNA5SP416-201ENST00000516838 111 ntBASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CYP39A1Q9NYL5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CYP39A1Q9NYL5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CYP39A1Q9NYL5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.02■□□□□ 0.79
CYP39A1Q9NYL5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CYP39A1Q9NYL5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CYP39A1Q9NYL5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CYP39A1Q9NYL5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.01■□□□□ 0.79
CYP39A1Q9NYL5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.01■□□□□ 0.79
CYP39A1Q9NYL5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CYP39A1Q9NYL5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.01■□□□□ 0.79
CYP39A1Q9NYL5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CYP39A1Q9NYL5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.01■□□□□ 0.79
CYP39A1Q9NYL5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms