Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 AC004870.1-201ENST00000315132 882 ntBASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 TPM4P1-201ENST00000436100 807 ntBASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 AC079781.3-201ENST00000449110 356 ntBASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 SAPCD2P3-201ENST00000455031 850 ntBASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 AC006116.8-202ENST00000587620 1550 ntBASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 BX276092.7-203ENST00000637198 1536 ntBASIC17.06■□□□□ 0.32
SPHK1Q9NYA1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 ABCD1P5-201ENST00000445663 754 ntBASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 AL031008.1-201ENST00000619963 541 ntBASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPHK1Q9NYA1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 BCL2-203ENST00000589955 5011 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms