Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 AC109322.1-201ENST00000524499 1264 ntBASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 AC015911.4-201ENST00000588022 1070 ntBASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 ACTL9-202ENST00000612068 1252 ntBASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC52A1Q9NWF4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 COX20P2-201ENST00000452636 358 ntBASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 AC092919.2-201ENST00000623631 1645 ntBASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
SLC52A1Q9NWF4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SLC52A1Q9NWF4 AC006116.8-202ENST00000587620 1550 ntBASIC25.14■■□□□ 1.62
SLC52A1Q9NWF4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC25.14■■□□□ 1.62
SLC52A1Q9NWF4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SLC52A1Q9NWF4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC25.14■■□□□ 1.62
SLC52A1Q9NWF4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
SLC52A1Q9NWF4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC25.14■■□□□ 1.62
SLC52A1Q9NWF4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC25.14■■□□□ 1.62
SLC52A1Q9NWF4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC25.14■■□□□ 1.62
SLC52A1Q9NWF4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC25.14■■□□□ 1.62
SLC52A1Q9NWF4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SLC52A1Q9NWF4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SLC52A1Q9NWF4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SLC52A1Q9NWF4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SLC52A1Q9NWF4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SLC52A1Q9NWF4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 CD99-202ENST00000381180 530 ntTSL 2 BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 AC112191.1-201ENST00000523689 701 ntBASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 LINC00628-201ENST00000628516 1289 ntBASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC25.13■■□□□ 1.61
SLC52A1Q9NWF4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 AC005498.2-205ENST00000593218 784 ntBASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms