Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ECHDC1Q9NTX5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.58■■□□□ 1.04
ECHDC1Q9NTX5 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.58■■□□□ 1.04
ECHDC1Q9NTX5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ECHDC1Q9NTX5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 NUS1P2-201ENST00000417358 873 ntBASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.57■■□□□ 1.04
ECHDC1Q9NTX5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 AC103564.2-201ENST00000432853 1299 ntBASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 AC002558.1-201ENST00000488906 803 ntBASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 KRT18P56-201ENST00000507275 550 ntBASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 MIR5100-201ENST00000579544 119 ntBASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 AL049757.1-201ENST00000616842 1596 ntBASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
ECHDC1Q9NTX5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 CLEC4GP1-201ENST00000596555 870 ntBASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ECHDC1Q9NTX5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 KRT16P4-201ENST00000453883 522 ntBASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms