Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
PRDM9Q9NQV7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRDM9Q9NQV7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PRDM9Q9NQV7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.77■□□□□ 0.27
PRDM9Q9NQV7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.77■□□□□ 0.27
PRDM9Q9NQV7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRDM9Q9NQV7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 AC009949.1-201ENST00000623048 1830 ntBASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 POM121L3P-201ENST00000419331 1163 ntBASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 AL121772.3-201ENST00000610840 674 ntBASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRDM9Q9NQV7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 COX5BP2-201ENST00000392354 334 ntBASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 FOSL1P1-201ENST00000511041 816 ntBASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 AC138894.3-201ENST00000603787 634 ntBASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 AC012313.10-201ENST00000623509 926 ntBASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRDM9Q9NQV7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 DUSP5P1-201ENST00000441325 1139 ntBASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 AC096582.2-201ENST00000510860 516 ntBASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 BNIP3P18-201ENST00000593976 575 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms