Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC096633.1-201ENST00000422446 749 ntBASIC18.32■□□□□ 0.52
HPS4Q9NQG7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 AC027601.4-201ENST00000611259 610 ntBASIC18.32■□□□□ 0.52
HPS4Q9NQG7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 AP002414.3-201ENST00000589352 1468 ntBASIC18.32■□□□□ 0.52
HPS4Q9NQG7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS4Q9NQG7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 KRT8P47-201ENST00000604727 1398 ntBASIC18.31■□□□□ 0.52
HPS4Q9NQG7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 BX005266.1-201ENST00000473402 457 ntBASIC18.31■□□□□ 0.52
HPS4Q9NQG7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 AL356488.2-201ENST00000602755 427 ntBASIC18.31■□□□□ 0.52
HPS4Q9NQG7 Z83851.2-201ENST00000609564 659 ntBASIC18.31■□□□□ 0.52
HPS4Q9NQG7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPS4Q9NQG7 AC079776.2-201ENST00000641154 1609 ntBASIC18.31■□□□□ 0.52
HPS4Q9NQG7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 PMPCAP1-201ENST00000508114 1576 ntBASIC18.3■□□□□ 0.52
HPS4Q9NQG7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 MED15P5-201ENST00000423150 992 ntBASIC18.3■□□□□ 0.52
HPS4Q9NQG7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 AC105339.3-201ENST00000560043 636 ntBASIC18.3■□□□□ 0.52
HPS4Q9NQG7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 FAM197Y3-203ENST00000618346 717 ntBASIC18.3■□□□□ 0.52
HPS4Q9NQG7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 AC093010.1-201ENST00000473625 1624 ntBASIC18.3■□□□□ 0.52
HPS4Q9NQG7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.3■□□□□ 0.52
HPS4Q9NQG7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS4Q9NQG7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HPS4Q9NQG7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HPS4Q9NQG7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS4Q9NQG7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS4Q9NQG7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS4Q9NQG7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.29■□□□□ 0.52
HPS4Q9NQG7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HPS4Q9NQG7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HPS4Q9NQG7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms