Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.67■□□□□ 0.58
CD248Q9HCU0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD248Q9HCU0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 HCG11-201ENST00000411553 5696 ntBASIC18.66■□□□□ 0.58
CD248Q9HCU0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 IGHGP-201ENST00000390555 1178 ntBASIC18.66■□□□□ 0.58
CD248Q9HCU0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 AP000867.3-201ENST00000524675 377 ntBASIC18.66■□□□□ 0.58
CD248Q9HCU0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 AC090616.6-201ENST00000582640 721 ntBASIC18.66■□□□□ 0.58
CD248Q9HCU0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.66■□□□□ 0.58
CD248Q9HCU0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD248Q9HCU0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CD248Q9HCU0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.65■□□□□ 0.58
CD248Q9HCU0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CD248Q9HCU0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CD248Q9HCU0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CD248Q9HCU0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.65■□□□□ 0.58
CD248Q9HCU0 EMBP1-201ENST00000458200 901 ntBASIC18.65■□□□□ 0.58
CD248Q9HCU0 RN7SL606P-201ENST00000472779 293 ntBASIC18.65■□□□□ 0.58
CD248Q9HCU0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 GPR32P1-201ENST00000601788 811 ntBASIC18.65■□□□□ 0.58
CD248Q9HCU0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CD248Q9HCU0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.65■□□□□ 0.58
CD248Q9HCU0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CD248Q9HCU0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.65■□□□□ 0.58
CD248Q9HCU0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD248Q9HCU0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CD248Q9HCU0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CD248Q9HCU0 AL513477.1-201ENST00000602865 2407 ntBASIC18.64■□□□□ 0.58
CD248Q9HCU0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD248Q9HCU0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CD248Q9HCU0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 GNAS-203ENST00000306120 1878 ntBASIC18.64■□□□□ 0.57
CD248Q9HCU0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms