Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 ATP5G2P1-201ENST00000433580 426 ntBASIC15.52■□□□□ 0.08
CDH20Q9HBT6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 TOB2P1-201ENST00000469761 992 ntBASIC15.52■□□□□ 0.08
CDH20Q9HBT6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 AC092329.2-201ENST00000598402 547 ntBASIC15.52■□□□□ 0.08
CDH20Q9HBT6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CDH20Q9HBT6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH20Q9HBT6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH20Q9HBT6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH20Q9HBT6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CDH20Q9HBT6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH20Q9HBT6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH20Q9HBT6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
CDH20Q9HBT6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH20Q9HBT6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 DRAXINP1-201ENST00000437611 948 ntBASIC15.51■□□□□ 0.07
CDH20Q9HBT6 AP002383.4-201ENST00000442518 975 ntBASIC15.51■□□□□ 0.07
CDH20Q9HBT6 HCG4P8-203ENST00000443049 980 ntBASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 AP000867.3-201ENST00000524675 377 ntBASIC15.51■□□□□ 0.07
CDH20Q9HBT6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
CDH20Q9HBT6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 KRT18P55-202ENST00000578578 1546 ntBASIC15.5■□□□□ 0.07
CDH20Q9HBT6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 AC246785.2-201ENST00000432512 513 ntBASIC15.5■□□□□ 0.07
CDH20Q9HBT6 AC104819.1-201ENST00000504587 486 ntBASIC15.5■□□□□ 0.07
CDH20Q9HBT6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 TPSP2-201ENST00000561760 610 ntBASIC15.5■□□□□ 0.07
CDH20Q9HBT6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 NPAP1P7-201ENST00000613027 823 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms