Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 PCDHB18P-201ENST00000524813 2368 ntBASIC20.59■□□□□ 0.89
EFCC1Q9HA90 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 AC006557.2-201ENST00000592985 1240 ntBASIC20.59■□□□□ 0.89
EFCC1Q9HA90 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCC1Q9HA90 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 AC005332.7-201ENST00000614046 2005 ntBASIC20.58■□□□□ 0.89
EFCC1Q9HA90 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 KRT18P27-201ENST00000427733 1299 ntBASIC20.58■□□□□ 0.89
EFCC1Q9HA90 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.58■□□□□ 0.89
EFCC1Q9HA90 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 AP000867.4-201ENST00000641616 219 ntBASIC20.58■□□□□ 0.89
EFCC1Q9HA90 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
EFCC1Q9HA90 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
EFCC1Q9HA90 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
EFCC1Q9HA90 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EFCC1Q9HA90 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EFCC1Q9HA90 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EFCC1Q9HA90 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EFCC1Q9HA90 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.58■□□□□ 0.88
EFCC1Q9HA90 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.58■□□□□ 0.88
EFCC1Q9HA90 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EFCC1Q9HA90 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EFCC1Q9HA90 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 BX005266.1-201ENST00000473402 457 ntBASIC20.57■□□□□ 0.88
EFCC1Q9HA90 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 AC092865.6-201ENST00000642101 219 ntBASIC20.57■□□□□ 0.88
EFCC1Q9HA90 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.57■□□□□ 0.88
EFCC1Q9HA90 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 AL022326.1-202ENST00000641533 845 ntBASIC20.56■□□□□ 0.88
EFCC1Q9HA90 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.56■□□□□ 0.88
EFCC1Q9HA90 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
EFCC1Q9HA90 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
EFCC1Q9HA90 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCC1Q9HA90 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCC1Q9HA90 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
EFCC1Q9HA90 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCC1Q9HA90 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.55■□□□□ 0.88
EFCC1Q9HA90 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.55■□□□□ 0.88
EFCC1Q9HA90 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms