Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 CICP11-201ENST00000434745 2827 ntBASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 AL451085.2-201ENST00000605085 799 ntBASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 AC044849.2-201ENST00000606596 710 ntBASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CYSTM1Q9H1C7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 LINC02012-201ENST00000608206 1725 ntBASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 GFER-205ENST00000569451 517 ntTSL 5 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 SNX5-217ENST00000606557 1087 ntBASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms